Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 108 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 70 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0508: glycosyl transferase group 1 (RefSeq)
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

28% id,
30% cov

C6H0M2: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare

25% id,
28% cov

SUS4_ORYSJ / Q10LP5: Sucrose synthase 4; OsSUS4; Sucrose-UDP glucosyltransferase 4; EC 2.4.1.13 from Oryza sativa

26% id,
27% cov

More...

DvMF_0673: glycosyl transferase group 1 (RefSeq)
is similar to:
PaperBLAST

CAA53081.1: sucrose synthase isoform I (Susy*Dc1) (EC 2.4.1.13)

22% id,
32% cov

SUS3_ARATH / Q9M111: Sucrose synthase 3; AtSUS3; Sucrose-UDP glucosyltransferase 3; EC 2.4.1.13 from Arabidopsis thaliana
SUS3 / Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana
Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

20% id,
35% cov

AAN76498.1: sucrose synthase (EC 2.4.1.13)

21% id,
32% cov

More...

DvMF_1098: glycosyl transferase group 1 (RefSeq)
is similar to:
PaperBLAST

BAB20799.1: sucrose synthase 1 (Sus1;PypSUS1) (EC 2.4.1.13)

23% id,
28% cov

SUS3_ARATH / Q9M111: Sucrose synthase 3; AtSUS3; Sucrose-UDP glucosyltransferase 3; EC 2.4.1.13 from Arabidopsis thaliana
SUS3 / Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana
Q9M111: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

22% id,
29% cov

CAA76057.1: sucrose synthase isoform II (Susy*Dc2) (EC 2.4.1.13)
O49845: sucrose synthase (EC 2.4.1.13) from Daucus carota

25% id,
24% cov

More...

DvMF_0676: glycosyl transferase group 1 (RefSeq)
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

32% id,
19% cov

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

30% id,
20% cov

SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus
AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13)
I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus

34% id,
11% cov

More...

DvMF_2279: glycosyl transferase group 1 (RefSeq)
is similar to:
PaperBLAST

SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus
BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)

24% id,
24% cov

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

28% id,
14% cov

BAB10337.1: At5g49190/K21P3.6 (sucrose synthase;Sus2) (EC 2.4.1.13)

27% id,
13% cov

More...

DvMF_3016: glycosyl transferase group 1 (RefSeq)
is similar to:
PaperBLAST

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

26% id,
20% cov

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

33% id,
13% cov

SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus
AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13)
I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus

34% id,
10% cov

DvMF_0989: 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq)
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

47% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory