Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 64 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0821: purine nucleoside phosphorylase (RefSeq)
is similar to:

A0A3G5E8S8: purine-nucleoside phosphorylase (EC from Aneurinibacillus migulanus

49% id,
93% cov

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC from Geobacillus stearothermophilus
P77834: purine-nucleoside phosphorylase (EC from Geobacillus stearothermophilus

49% id,
92% cov

P55859: purine-nucleoside phosphorylase (EC from Bos taurus

49% id,
90% cov


DvMF_0348: Triose-phosphate isomerase (RefSeq)
is similar to:

P00941: purine-nucleoside phosphorylase (EC from Homo sapiens

42% id,
95% cov

DvMF_2317: protein of unknown function DUF152 (RefSeq)
is similar to:

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC; EC; EC 1.10.3.-; EC from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC; EC; EC; EC from Escherichia coli

35% id,
96% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC; EC; EC from Bacteroides thetaiotaomicron

29% id,
90% cov

LACC1_HUMAN / Q8IV20: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC; EC; EC from Homo sapiens

29% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory