Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 51 curated entries in PaperBLAST's database that match '2.6.1.11'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_3149: acetylornithine aminotransferase (RefSeq)
is similar to:
PaperBLAST

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

42% id,
95% cov

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

43% id,
91% cov

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

39% id,
98% cov

More...

DvMF_0361: LL-diaminopimelate aminotransferase (RefSeq)
is similar to:
PaperBLAST

MTNE_BACSU / O31665: L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis
mtnE / O31665: L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis
O31665: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis

41% id,
96% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

26% id,
86% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

27% id,
84% cov

More...

DvMF_1411: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

MTNE_BACSU / O31665: L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis
mtnE / O31665: L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis
O31665: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis

40% id,
97% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

27% id,
83% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

24% id,
91% cov

More...

DvMF_1911: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

35% id,
97% cov

DvMF_1002: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq)
is similar to:
PaperBLAST

AZOBR_RS19025: acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] from Azospirillum brasilense

34% id,
99% cov

GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

34% id,
91% cov

2ordA / Q9X2A5: Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

29% id,
100% cov

More...

DvMF_0516: aminotransferase class-III (RefSeq)
is similar to:
PaperBLAST

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

32% id,
100% cov

PAMT_CAPAN / E1AQY3: Vanillin aminotransferase; Putative aminotransferase; pAMT; EC 2.6.1.119 from Capsicum annuum

34% id,
91% cov

2ordA / Q9X2A5: Crystal structure of acetylornithine aminotransferase (ec 2.6.1.11) (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution

31% id,
99% cov

More...

DvMF_2502: glutamate-1-semialdehyde aminotransferase (RefSeq)
is similar to:
PaperBLAST

KAT_CLOAI / B0VH76: 3-aminobutyryl-CoA aminotransferase; HemL-like protein; EC 2.6.1.111 from Cloacimonas acidaminovorans
B0VH76: 3-aminobutanoyl-CoA transaminase (EC 2.6.1.111) from Candidatus Cloacimonas

31% id,
96% cov

GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

30% id,
92% cov

B1XNF8: acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) from Synechococcus sp.

28% id,
93% cov

More...

DvMF_2809: aminotransferase class V (RefSeq)
is similar to:
PaperBLAST

PUCG_BACSU / O32148: (S)-ureidoglycine--glyoxylate transaminase; UGXT; (S)-ureidoglycine--glyoxylate aminotransferase; Purine catabolism protein PucG; EC 2.6.1.112 from Bacillus subtilis

30% id,
90% cov

D8V0F7: (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) from Bacillus subtilis

30% id,
89% cov

DvMF_1715: aminotransferase class V (RefSeq)
is similar to:
PaperBLAST

PUCG_BACSU / O32148: (S)-ureidoglycine--glyoxylate transaminase; UGXT; (S)-ureidoglycine--glyoxylate aminotransferase; Purine catabolism protein PucG; EC 2.6.1.112 from Bacillus subtilis

28% id,
97% cov

D8V0F7: (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) from Bacillus subtilis

28% id,
96% cov

DvMF_2204: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

MTNE_BACSU / O31665: L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis
mtnE / O31665: L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis
O31665: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis

29% id,
93% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

28% id,
92% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

30% id,
85% cov

More...

DvMF_1564: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

MTNE_BACSU / O31665: L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis
mtnE / O31665: L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis
O31665: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis

30% id,
88% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

28% id,
93% cov

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

28% id,
85% cov

More...

DvMF_1891: Glutamine--scyllo-inositol transaminase (RefSeq)
is similar to:
PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

29% id,
91% cov

DvMF_1906: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

30% id,
83% cov

DvMF_1822: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

28% id,
79% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

25% id,
75% cov

A0A1D6I5Q5: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Zea mays

26% id,
69% cov

DvMF_2889: aspartate aminotransferase (RefSeq)
is similar to:
PaperBLAST

101251438 / A0A3Q7IS73: 2-oxo-4-methylthiobutanoate-glutamine aminotransferase monomer (EC 2.6.1.117) from Solanum lycopersicum

25% id,
77% cov

A0A1D6I5Q5: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Zea mays

26% id,
69% cov

CCBL1 / Q16773: kynurenine aminotransferase I subunit (EC 2.6.1.117; EC 2.6.1.7; EC 4.4.1.13; EC 2.6.1.64) from Homo sapiens

30% id,
56% cov

DvMF_0682: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

SPNR_SACSN / Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase; dTDP-4-keto-2,3,6-trideoxy-D-glucose 4-aminotransferase; EC 2.6.1.110 from Saccharopolyspora spinosa
spnR / Q9ALN9: dTDP-4-amino-2,3,4,6-tetradeoxy-D-glucose:2-oxoglutarate aminotransferase subunit (EC 2.6.1.110) from Saccharopolyspora spinosa
Q9ALN9: dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase (EC 2.6.1.110) from Saccharopolyspora spinosa

30% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1929042-1930559 (frame -2) on 254340
is similar to:
PaperBLAST

A0A1D6I5Q5: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Zea mays
Also see hits to annotated proteins above

29% id,
91% cov

3645376-3646674 (frame -1) on 254340
is similar to:
PaperBLAST

A0A1D6I5Q5: L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Zea mays
Also see hits to annotated proteins above

25% id,
78% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory