Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 58 curated entries in PaperBLAST's database that match '2.7.1.12'.

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2582: dihydroxyacetone kinase subunit DhaK (RefSeq)
is similar to:
PaperBLAST

DHAK_ECOLI / P76015: PEP-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK; EC 2.7.1.121 from Escherichia coli
YcgT / b1200: dihydroxyacetone kinase subunit K (EC 2.7.1.121) from Escherichia coli
dhaK / P76015: dihydroxyacetone kinase subunit K (EC 2.7.1.121) from Escherichia coli
P76015: phosphoenolpyruvate-glycerone phosphotransferase (subunit 2/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

60% id,
100% cov

DHAK_LACLA / Q9CIV8: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK; EC 2.7.1.121 from Lactococcus lactis

45% id,
99% cov

DHAK2_LISIN / Q92EU2: PTS-dependent dihydroxyacetone kinase 2, dihydroxyacetone-binding subunit DhaK; EC 2.7.1.121 from Listeria innocua

36% id,
100% cov

DvMF_2583: dihydroxyacetone kinase, L subunit (RefSeq)
is similar to:
PaperBLAST

DHAL_ECOLI / P76014: PEP-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL; EC 2.7.1.121 from Escherichia coli
YcgS / b1199: dihydroxyacetone kinase subunit L (EC 2.7.1.121) from Escherichia coli
dhaL / P76014: dihydroxyacetone kinase subunit L (EC 2.7.1.121) from Escherichia coli
P76014: phosphoenolpyruvate-glycerone phosphotransferase (subunit 3/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

54% id,
97% cov

DHAL2_LISIN / Q92EU3: PEP-dependent dihydroxyacetone kinase 2, ADP-binding subunit DhaL; EC 2.7.1.121 from Listeria innocua

43% id,
92% cov

DHAL_LACLA / Q9CIV7: PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL; EC 2.7.1.121 from Lactococcus lactis

37% id,
99% cov

DvMF_2584: phosphoenolpyruvate-protein phosphotransferase (RefSeq)
is similar to:
PaperBLAST

DHAM_PANAM / D4GL26: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Pantoea ananatis

41% id,
95% cov

DHAM_KLEM8 / A0A0H3H456: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Klebsiella michiganensis

38% id,
98% cov

DHAM_PROSM / P0DN88: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Providencia stuartii

33% id,
100% cov

More...

DvMF_1410: Shikimate kinase (RefSeq)
is similar to:
PaperBLAST

GCNK_GLUOX / Q5FQ97: Gluconokinase; Gluconate kinase; EC 2.7.1.12 from Gluconobacter oxydans

31% id,
82% cov

DvMF_0971: shikimate kinase (RefSeq)
is similar to:
PaperBLAST

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

43% id,
20% cov

DvMF_2878: Phosphotransferase system, phosphocarrier protein HPr (RefSeq)
is similar to:
PaperBLAST

DHAM_PROSM / P0DN88: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Providencia stuartii

34% id,
19% cov

DHAM_KLEM8 / A0A0H3H456: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Klebsiella michiganensis

33% id,
20% cov

DHAM_PANAM / D4GL26: PEP-dependent dihydroxyacetone kinase, phosphoryl donor subunit DhaM; Dihydroxyacetone kinase subunit M; EC 2.7.1.121 from Pantoea ananatis

33% id,
19% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory