Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 19 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2801: Hydroxypyruvate reductase (RefSeq)
is similar to:

GCK_PYRHO / O58231: Glycerate 2-kinase; GCK; 2-phosphoglycerate forming glycerate kinase; EC from Pyrococcus horikoshii
O58231: glycerate 2-kinase (EC from Pyrococcus horikoshii

42% id,
97% cov

GCK_THEMA / Q9X1S1: D-glycerate 2-kinase; GCK; EC from Thermotoga maritima
Q9X1S1: glycerate 2-kinase (EC from Thermotoga maritima

38% id,
99% cov

Q703V9: glycerate 2-kinase (EC from Thermoproteus tenax

33% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory