Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 20 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1377: gamma-glutamyl kinase (RefSeq)
is similar to:

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC from Escherichia coli
proB: glutamate 5-kinase; EC from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC from Escherichia coli
P0A7B5: glutamate 5-kinase (EC from Escherichia coli

41% id,
99% cov

Ga0059261_3512: glutamate 5-kinase (EC from Sphingomonas koreensis

37% id,
98% cov

Q6E235: glutamate 5-kinase (EC from Bacillus subtilis

38% id,
96% cov


DvMF_0612: gamma-glutamyl phosphate reductase (RefSeq)
is similar to:

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC; EC from Arabidopsis thaliana

38% id,
56% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC; EC from Oryza sativa

36% id,
58% cov

P5CS_HUMAN / P54886: Delta-1-pyrroline-5-carboxylate synthase; P5CS; Aldehyde dehydrogenase family 18 member A1; EC; EC from Homo sapiens
ALDH18A1 / P54886: δ-1-pyrroline-5-carboxylate synthase (EC; EC from Homo sapiens

38% id,
51% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory