Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0060: UTP-glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:
PaperBLAST

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

49% id,
99% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

49% id,
98% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

42% id,
96% cov

More...

DvMF_3172: UTP--glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:
PaperBLAST

UGP1 / P32861: UDP-glucose pyrophosphorylase subunit (EC 2.7.7.64) from Saccharomyces cerevisiae

39% id,
89% cov

UGP / Q9M9P3: UDP-glucose pyrophosphorylase (EC 2.7.7.64) from Arabidopsis thaliana

38% id,
87% cov

A8BJJ7: UTP-monosaccharide-1-phosphate uridylyltransferase (EC 2.7.7.64); UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Giardia intestinalis

37% id,
86% cov

More...

DvMF_1841: UDP-N-acetylglucosamine pyrophosphorylase related protein (RefSeq)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

29% id,
95% cov

DvMF_1381: glucose-1-phosphate thymidylyltransferase (RefSeq)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

28% id,
95% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

29% id,
78% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

27% id,
63% cov

More...

DvMF_1908: glucose-1-phosphate cytidylyltransferase (RefSeq)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

28% id,
72% cov

DvMF_0016: transferase, putative (RefSeq)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

39% id,
30% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory