Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 51 curated entries in PaperBLAST's database that match '2.7.7.9' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0060: UTP-glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:
PaperBLAST

GTAB_STAA8 / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Staphylococcus aureus

49% id,
99% cov

GTAB_BACSU / Q05852: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; General stress protein 33; GSP33; UDP-glucose pyrophosphorylase; UDPGP; UGPase; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Bacillus subtilis

49% id,
98% cov

A0A0H2X8N4: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas campestris

50% id,
92% cov

More...

DvMF_3172: UTP--glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:
PaperBLAST

D3HTY9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Trypanosoma brucei

44% id,
95% cov

Q4QDU3: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Leishmania major

42% id,
95% cov

Q43772: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Hordeum vulgare

39% id,
93% cov

More...

DvMF_0282: nucleotide sugar dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

29% id,
95% cov

DvMF_1841: UDP-N-acetylglucosamine pyrophosphorylase related protein (RefSeq)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

29% id,
95% cov

DvMF_1381: glucose-1-phosphate thymidylyltransferase (RefSeq)
is similar to:
PaperBLAST

Q8YS18: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Nostoc sp.

28% id,
96% cov

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

28% id,
95% cov

Q8GQP8: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

30% id,
83% cov

More...

DvMF_1908: glucose-1-phosphate cytidylyltransferase (RefSeq)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

28% id,
72% cov

DvMF_0016: transferase, putative (RefSeq)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

39% id,
30% cov

CUGP_SYNY3 / P74285: UTP--glucose-1-phosphate uridylyltransferase; Cyanobacterial UDP-glucose pyrophosphorylase; UDP-glucose pyrophosphorylase; UDP-Glc PPase; EC 2.7.7.9 from Synechocystis sp.
P74285: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Synechocystis sp.

31% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory