Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 27 curated entries in PaperBLAST's database that match '3.1.3.15'.

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1050: Inositol-phosphate phosphatase (RefSeq)
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis

33% id,
99% cov

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

32% id,
100% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

30% id,
98% cov

More...

DvMF_0345: Inositol-phosphate phosphatase (RefSeq)
is similar to:
PaperBLAST

HISN_STRCO / Q9K4B1: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Streptomyces coelicolor

34% id,
95% cov

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis

34% id,
87% cov

HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum
hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum
Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum

29% id,
97% cov

More...

DvMF_0940: histidinol phosphate phosphatase HisJ family (RefSeq)
is similar to:
PaperBLAST

hisK / Q5SLG2: histidinol phosphate phosphatase subunit (EC 3.1.3.15) from Thermus thermophilus

33% id,
96% cov

DvMF_3122: Imidazoleglycerol-phosphate dehydratase (RefSeq)
is similar to:
PaperBLAST

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

44% id,
51% cov

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

42% id,
54% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

42% id,
54% cov

More...

DvMF_2396: carbonic anhydrase (RefSeq)
is similar to:
PaperBLAST

S5FU55: histidinol-phosphatase (EC 3.1.3.15) from Acidithiobacillus thiooxidans

24% id,
74% cov

DvMF_2027: inositol monophosphatase (RefSeq)
is similar to:
PaperBLAST

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis

38% id,
45% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

35% id,
45% cov

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

33% id,
47% cov

More...

DvMF_3135: histidinol-phosphate phosphatase family protein (RefSeq)
is similar to:
PaperBLAST

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

29% id,
41% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

28% id,
39% cov

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

28% id,
39% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory