Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0756: glycosyl transferase family 2 (RefSeq)
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

28% id,
66% cov

DvMF_0840: glycogen branching enzyme (RefSeq)
is similar to:
PaperBLAST

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

25% id,
56% cov

DvMF_2091: hypothetical protein (RefSeq)
is similar to:
PaperBLAST

Q2V621: mannosyl-oligosaccharide glucosidase (EC 3.2.1.106); alpha-glucosidase (EC 3.2.1.20); mannosyl-oligosaccharide alpha-1,3-glucosidase (EC 3.2.1.207) from Candida albicans

29% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory