Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 8 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0550: diaminopimelate aminotransferase (RefSeq)
is similar to:

ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC from Dictyostelium discoideum

29% id,
71% cov

Q9C5C4: acetylornithine deacetylase (EC from Arabidopsis thaliana

29% id,
55% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory