Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_0015: peptidase C26 (RefSeq)
is similar to:

SO1267: Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC from Shewanella oneidensis

32% id,
81% cov

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC from Pseudomonas fluorescens

33% id,
77% cov

Sama_2645: Gamma-glutamyl-GABA hydrolase (EC from Shewanella amazonensis

29% id,
78% cov


DvMF_0433: CTP synthetase (RefSeq)
is similar to:

BWI76_RS10705: Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC from Klebsiella michiganensis

46% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory