Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 65 curated entries in PaperBLAST's database that match '3.7.1.2'.

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2925: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase (RefSeq) is similar to:	PaperBLAST
K0A9N9: fumarylacetoacetase (EC 3.7.1.2) from Exiguobacterium antarcticum	44% id, 77% cov
C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.	39% id, 85% cov
HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae	38% id, 85% cov
A0A080VH08: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Pseudomonas aeruginosa	33% id, 98% cov
A0A1B0ZSC0: fumarylacetoacetase (EC 3.7.1.2) from Phaeobacter gallaeciensis	32% id, 97% cov
NAGK_RALSP / O86042: Fumarylpyruvate hydrolase; Naphthalene degradation protein K; EC 3.7.1.20 from Ralstonia sp. nagK / O86042: fumarylpyruvate hydrolase (EC 3.7.1.20) from Ralstonia sp. O86042: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Ralstonia sp.	31% id, 99% cov
G2IPX5: maleylpyruvate hydrolase (EC 3.7.1.23) from Sphingobium sp.	42% id, 74% cov
lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.	39% id, 79% cov
A0A0M3SVN7: fumarylacetoacetase (EC 3.7.1.2) from Cupriavidus gilardii	33% id, 89% cov
naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.	32% id, 89% cov
A0A0D5YDA5: fumarylacetoacetase (EC 3.7.1.2) from Acinetobacter baumannii	31% id, 92% cov
BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans	45% id, 64% cov
HBZF_PSEAC / Q0QFQ3: Maleylpyruvate hydrolase; MPH11; EC 3.7.1.23 from Pseudomonas alcaligenes hbzF / Q0QFQ3: maleylpyruvate hydrolase monomer (EC 3.7.1.23) from Pseudomonas alcaligenes Q0QFQ3: maleylpyruvate hydrolase (EC 3.7.1.23) from Pseudomonas alcaligenes	36% id, 78% cov
A0A076VF18: fumarylacetoacetase (EC 3.7.1.2) from Rhodotorula diobovata	30% id, 92% cov
A0A1R4GQY2: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Corynebacterium glutamicum	34% id, 77% cov
More...

DvMF_0153: acetolactate synthase, large subunit, biosynthetic type (RefSeq) is similar to:	PaperBLAST
PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens	28% id, 92% cov
SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti	29% id, 88% cov
PS417_11870: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas simiae	29% id, 88% cov
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae	28% id, 87% cov
Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum	27% id, 86% cov
IOLD_BACSU / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; THcHDO hydrolase; EC 3.7.1.22 from Bacillus subtilis iolD / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC 3.7.1.22) from Bacillus subtilis P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Bacillus subtilis	25% id, 88% cov
BWI76_RS03090: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Klebsiella michiganensis	28% id, 65% cov
AO353_21360: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens	30% id, 51% cov
AO356_23185: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens	30% id, 50% cov
Pf1N1B4_4279: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens	30% id, 50% cov
More...

DvMF_1934: sulfoacetaldehyde acetyltransferase (RefSeq) is similar to:	PaperBLAST
PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens	28% id, 85% cov
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae	27% id, 83% cov
SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti	26% id, 87% cov
Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum	25% id, 82% cov
BWI76_RS03090: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Klebsiella michiganensis	27% id, 45% cov
IOLD_BACSU / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; THcHDO hydrolase; EC 3.7.1.22 from Bacillus subtilis iolD / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC 3.7.1.22) from Bacillus subtilis P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Bacillus subtilis	34% id, 22% cov
More...

DvMF_0515: sulfoacetaldehyde acetyltransferase (RefSeq) is similar to:	PaperBLAST
PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens	27% id, 85% cov
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae	27% id, 83% cov
SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti	25% id, 87% cov
Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum	25% id, 82% cov
BWI76_RS03090: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Klebsiella michiganensis	27% id, 45% cov
IOLD_BACSU / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; THcHDO hydrolase; EC 3.7.1.22 from Bacillus subtilis iolD / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC 3.7.1.22) from Bacillus subtilis P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Bacillus subtilis	34% id, 22% cov
More...

DvMF_1883: acetolactate synthase catalytic subunit (RefSeq) is similar to:	PaperBLAST
HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae	26% id, 80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory