Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18'.
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
| DvMF_0353: diaminopimelate decarboxylase (RefSeq) is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 36% id, 100% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 26% id, 95% cov |
| DvMF_1010: diaminopimelate decarboxylase (RefSeq) is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 35% id, 95% cov |
| DvMF_1885: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 39% id, 83% cov |
| DvMF_2916: Aromatic-L-amino-acid decarboxylase (RefSeq) is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 31% id, 96% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 29% id, 82% cov |
| DvMF_0170: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 29% id, 82% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2321820-2322488 (frame -2) on 254340 is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 38% id, 87% cov |
Lawrence Berkeley National Laboratory