Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 56 curated entries in PaperBLAST's database that match '4.1.1.19'.

These curated entries have 40 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1536: arginine decarboxylase (RefSeq) is similar to:	PaperBLAST
A0A076IP90: arginine decarboxylase (EC 4.1.1.19) from Phocaeicola dorei	43% id, 100% cov
ADC / P49726: arginine decarboxylase (EC 4.1.1.19) from Solanum lycopersicum	41% id, 100% cov
Q8YRP3: arginine decarboxylase (EC 4.1.1.19) from Nostoc sp.	44% id, 92% cov
Psest_3366: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas stutzeri	41% id, 98% cov
speA / Q9HUX1: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Pseudomonas aeruginosa Q9HUX1: arginine decarboxylase (EC 4.1.1.19) from Pseudomonas aeruginosa A0A0H2ZHZ8: arginine decarboxylase (EC 4.1.1.19) from Pseudomonas aeruginosa	40% id, 100% cov
P74576: arginine decarboxylase (EC 4.1.1.19) from Synechocystis sp.	42% id, 94% cov
Q7MK24: arginine decarboxylase (EC 4.1.1.19) from Vibrio vulnificus	39% id, 99% cov
P72587: arginine decarboxylase (EC 4.1.1.19) from Synechocystis sp.	40% id, 97% cov
Pf1N1B4_1296: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas fluorescens	39% id, 98% cov
SPEA_ECOLI / P21170: Biosynthetic arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli SpeA / b2938: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Escherichia coli speA / P21170: biosynthetic arginine decarboxylase (EC 4.1.1.19) from Escherichia coli P21170: arginine decarboxylase (EC 4.1.1.19) from Escherichia coli	38% id, 97% cov
Q8ZHG8: arginine decarboxylase (EC 4.1.1.19) from Yersinia pestis	38% id, 97% cov
SPE1_ORYSJ / Q9SNN0: Arginine decarboxylase 1; ARGDC1; OsADC1; EC 4.1.1.19 from Oryza sativa Q9SNN0: arginine decarboxylase (EC 4.1.1.19) from Oryza sativa	40% id, 85% cov
MADC2 / Q9M618: arginine decarboxylase (EC 4.1.1.19) from Brassica juncea	38% id, 87% cov
SPE1_ARATH / Q9SI64: Arginine decarboxylase 1, chloroplastic; ADC 1; ADC-O; ARGDC 1; AtADC1; EC 4.1.1.19 from Arabidopsis thaliana Q9SI64: arginine decarboxylase (EC 4.1.1.19) from Arabidopsis thaliana	39% id, 85% cov
ADC1A_TOBAC / A0A1S3YCW2: Arginine decarboxylase 1A, chloroplastic; EC 4.1.1.19 from Nicotiana tabacum	39% id, 85% cov
B3Y023: arginine decarboxylase (EC 4.1.1.19) from Prunus persica	39% id, 84% cov
Q0PAC6: arginine decarboxylase (EC 4.1.1.19) from Campylobacter jejuni	35% id, 94% cov
ADC1B_TOBAC / A0A1S3WYR7: Arginine decarboxylase 1B, chloroplastic; EC 4.1.1.19 from Nicotiana tabacum	38% id, 85% cov
Q9M7K9: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	39% id, 84% cov
SPE2_ARATH / O23141: Arginine decarboxylase 2; ADC 2; ARGDC 2; AtADC2; ADC-N; EC 4.1.1.19 from Arabidopsis thaliana O23141: arginine decarboxylase (EC 4.1.1.19) from Arabidopsis thaliana	38% id, 85% cov
Q9LDM9: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	39% id, 84% cov
Q71S28: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	38% id, 84% cov
Q39827: arginine decarboxylase (EC 4.1.1.19) from Glycine max	37% id, 87% cov
Q5R1Y5: arginine decarboxylase (EC 4.1.1.19) from Malus domestica	39% id, 84% cov
SPE1 / P22220: arginine decarboxylase (EC 4.1.1.19) from Avena sativa P22220: arginine decarboxylase (EC 4.1.1.19) from Avena sativa	33% id, 98% cov
O25176: arginine decarboxylase (EC 4.1.1.19) from Helicobacter pylori	34% id, 94% cov
MADC3 / Q9M617: arginine decarboxylase (EC 4.1.1.19) from Brassica juncea	36% id, 88% cov
F6KDF0: arginine decarboxylase (EC 4.1.1.19) from Citrus trifoliata	38% id, 82% cov
ADC / Q43075: arginine decarboxylase (EC 4.1.1.19) from Pisum sativum	38% id, 82% cov
ADC2_ORYSJ / Q7XRA1: Arginine decarboxylase 2; ARGDC2; OsADC2; EC 4.1.1.19 from Oryza sativa	40% id, 59% cov
ADC2_ORYSJ / Q7XRA1: Arginine decarboxylase 2; ARGDC2; OsADC2; EC 4.1.1.19 from Oryza sativa	39% id, 25% cov
More...

DvMF_0353: diaminopimelate decarboxylase (RefSeq) is similar to:	PaperBLAST
ADC / P49726: arginine decarboxylase (EC 4.1.1.19) from Solanum lycopersicum	26% id, 60% cov
Q8YRP3: arginine decarboxylase (EC 4.1.1.19) from Nostoc sp.	26% id, 46% cov
SPEA_ECOLI / P21170: Biosynthetic arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli SpeA / b2938: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Escherichia coli speA / P21170: biosynthetic arginine decarboxylase (EC 4.1.1.19) from Escherichia coli P21170: arginine decarboxylase (EC 4.1.1.19) from Escherichia coli	25% id, 47% cov
Psest_3366: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas stutzeri	26% id, 43% cov
A0A076IP90: arginine decarboxylase (EC 4.1.1.19) from Phocaeicola dorei	24% id, 48% cov
ADC / Q43075: arginine decarboxylase (EC 4.1.1.19) from Pisum sativum	25% id, 42% cov
Q8ZHG8: arginine decarboxylase (EC 4.1.1.19) from Yersinia pestis	26% id, 41% cov
MADC2 / Q9M618: arginine decarboxylase (EC 4.1.1.19) from Brassica juncea	25% id, 43% cov
Q39827: arginine decarboxylase (EC 4.1.1.19) from Glycine max	26% id, 41% cov
SPE1_ORYSJ / Q9SNN0: Arginine decarboxylase 1; ARGDC1; OsADC1; EC 4.1.1.19 from Oryza sativa Q9SNN0: arginine decarboxylase (EC 4.1.1.19) from Oryza sativa	27% id, 38% cov
Q71S28: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	25% id, 40% cov
Q9LDM9: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	25% id, 39% cov
Q9M7K9: arginine decarboxylase (EC 4.1.1.19) from Nicotiana tabacum	25% id, 39% cov
F6KDF0: arginine decarboxylase (EC 4.1.1.19) from Citrus trifoliata	25% id, 39% cov
P74576: arginine decarboxylase (EC 4.1.1.19) from Synechocystis sp.	27% id, 36% cov
ADC1B_TOBAC / A0A1S3WYR7: Arginine decarboxylase 1B, chloroplastic; EC 4.1.1.19 from Nicotiana tabacum	25% id, 39% cov
MADC3 / Q9M617: arginine decarboxylase (EC 4.1.1.19) from Brassica juncea	24% id, 39% cov
ADC1A_TOBAC / A0A1S3YCW2: Arginine decarboxylase 1A, chloroplastic; EC 4.1.1.19 from Nicotiana tabacum	24% id, 39% cov
speA / Q9HUX1: arginine decarboxylase, biosynthetic (EC 4.1.1.19) from Pseudomonas aeruginosa Q9HUX1: arginine decarboxylase (EC 4.1.1.19) from Pseudomonas aeruginosa A0A0H2ZHZ8: arginine decarboxylase (EC 4.1.1.19) from Pseudomonas aeruginosa	28% id, 32% cov
Pf1N1B4_1296: Biosynthetic arginine decarboxylase (EC 4.1.1.19) from Pseudomonas fluorescens	27% id, 32% cov
B3Y023: arginine decarboxylase (EC 4.1.1.19) from Prunus persica	26% id, 32% cov
SPE1_ARATH / Q9SI64: Arginine decarboxylase 1, chloroplastic; ADC 1; ADC-O; ARGDC 1; AtADC1; EC 4.1.1.19 from Arabidopsis thaliana Q9SI64: arginine decarboxylase (EC 4.1.1.19) from Arabidopsis thaliana	28% id, 30% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory