Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 11 curated entries in PaperBLAST's database that match '4.1.1.48' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
DvMF_1743: Indole-3-glycerol-phosphate synthase (RefSeq) is similar to: | PaperBLAST |
P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus | 39% id, 100% cov |
trpC / Q9YGB5: indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermococcus kodakarensis | 36% id, 93% cov |
A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis | 36% id, 92% cov |
DvMF_1742: Phosphoribosylanthranilate isomerase (RefSeq) is similar to: | PaperBLAST |
TrpC / b1262: fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli | 38% id, 43% cov |
DvMF_1745: glutamine amidotransferase of anthranilate synthase (RefSeq) is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 41% id, 39% cov |
DvMF_2316: glutamine amidotransferase class-I (RefSeq) is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 32% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
2132408-2133145 (frame -3) on 254340 is similar to: | PaperBLAST |
TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae | 40% id, 41% cov |
Lawrence Berkeley National Laboratory