Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 128 curated entries in PaperBLAST's database that match '4.2.1.10'.
These curated entries have 94 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
| DvMF_0373: 3-dehydroquinate dehydratase (RefSeq) is similar to: | PaperBLAST |
D4LCT8: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Ruminococcus champanellensis | 52% id, 95% cov |
qsuC / A4QB64: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum | 48% id, 95% cov |
O52377: 3-dehydroquinate dehydratase (EC 4.2.1.10) from Corynebacterium glutamicum | 48% id, 95% cov |
| DvMF_2560: transcriptional regulator, AraC family (RefSeq) is similar to: | PaperBLAST |
Q4K977: cyclohexyl-isocyanide hydratase (EC 4.2.1.103) from Pseudomonas fluorescens | 39% id, 96% cov |
INHA_PSEPU / Q8G9F9: Isonitrile hydratase; Cyclohexyl-isocyanide hydratase; EC 4.2.1.103 from Pseudomonas putida | 39% id, 79% cov |
| DvMF_2562: ThiJ/PfpI domain protein (RefSeq) is similar to: | PaperBLAST |
Q4K977: cyclohexyl-isocyanide hydratase (EC 4.2.1.103) from Pseudomonas fluorescens | 42% id, 81% cov |
INHA_PSEPU / Q8G9F9: Isonitrile hydratase; Cyclohexyl-isocyanide hydratase; EC 4.2.1.103 from Pseudomonas putida | 40% id, 81% cov |
| DvMF_1962: shikimate 5-dehydrogenase (RefSeq) is similar to: | PaperBLAST |
A0A5H2WZU5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 31% id, 52% cov |
A0A5H2X4C4: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Eucalyptus camaldulensis | 30% id, 51% cov |
Q6PUG0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 29% id, 53% cov |
| DvMF_3100: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
DHB4_HUMAN / P51659: Peroxisomal multifunctional enzyme type 2; MFE-2; 17-beta-hydroxysteroid dehydrogenase 4; 17-beta-HSD 4; D-bifunctional protein; DBP; Multifunctional protein 2; MFP-2; Short chain dehydrogenase/reductase family 8C member 1; EC 1.1.1.n12; EC 4.2.1.107; EC 4.2.1.119 from Homo sapiens | 34% id, 29% cov |
DHB4_RAT / P97852: Peroxisomal multifunctional enzyme type 2; MFE-2; 17-beta-hydroxysteroid dehydrogenase 4; 17-beta-HSD 4; D-bifunctional protein; DBP; Multifunctional protein 2; MFP-2; EC 1.1.1.n12; EC 4.2.1.107; EC 4.2.1.119 from Rattus norvegicus | 33% id, 29% cov |
DHB4_MOUSE / P51660: Peroxisomal multifunctional enzyme type 2; MFE-2; 17-beta-hydroxysteroid dehydrogenase 4; 17-beta-HSD 4; D-bifunctional protein; DBP; Multifunctional protein 2; MFP-2; EC 1.1.1.n12; EC 4.2.1.107; EC 4.2.1.119 from Mus musculus | 32% id, 29% cov |
| DvMF_1748: 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 31% id, 28% cov |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 32% id, 27% cov |
| DvMF_0296: glutamyl-tRNA reductase (RefSeq) is similar to: | PaperBLAST |
DHQSD_ARATH / Q9SQT8: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic; DHQ-SDH protein; DHQase-SORase; Protein EMBRYO DEFECTIVE 3004; EC 4.2.1.10; EC 1.1.1.25 from Arabidopsis thaliana | 25% id, 33% cov |
Q6PUF9: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); 3-dehydroquinate dehydratase (EC 4.2.1.10) from Nicotiana tabacum | 28% id, 28% cov |
| DvMF_0971: shikimate kinase (RefSeq) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 30% id, 6% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2135438-2136892 (frame -3) on 254340 is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 31% id, 29% cov |
Lawrence Berkeley National Laboratory