Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 62 curated entries in PaperBLAST's database that match '4.2.1.17' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1213439-1215037 (frame +2) on 254340
is similar to:
PaperBLAST

ptmH / D8L2U3: 2-enoyl acyl-CoA hydratase (EC 4.2.1.17) from Streptomyces platensis

38% id,
19% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory