Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
| DvMF_2848: CBS domain containing membrane protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 41% id, 97% cov |
| DvMF_1585: CBS domain containing protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 38% id, 96% cov |
| DvMF_2658: cysteine synthase (RefSeq) is similar to: | PaperBLAST |
cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori | 37% id, 100% cov |
F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum | 37% id, 100% cov |
Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis | 45% id, 65% cov |
| DvMF_3126: inosine-5'-monophosphate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 31% id, 93% cov |
| DvMF_0278: CBS domain containing membrane protein (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 34% id, 62% cov |
| DvMF_0413: putative signal transduction protein with CBS domains (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 37% id, 56% cov |
| DvMF_0967: putative transcriptional regulator, XRE family (RefSeq) is similar to: | PaperBLAST |
Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus | 36% id, 24% cov |
| DvMF_0553: CBS domain containing protein (RefSeq) is similar to: | PaperBLAST |
Q3TWN3: cystathionine beta-synthase (EC 4.2.1.22) from Mus musculus | 33% id, 19% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3953881-3955044 (frame -1) on 254340 is similar to: | PaperBLAST |
Q3TWN3: cystathionine beta-synthase (EC 4.2.1.22) from Mus musculus | 24% id, 33% cov |
Lawrence Berkeley National Laboratory