Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 110 curated entries in PaperBLAST's database that match '4.3.1.1'.
These curated entries have 73 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
| DvMF_0011: serine dehydratase alpha chain (RefSeq) is similar to: | PaperBLAST |
DvMF_0011: L-serine ammonia-lyase (EC 4.3.1.17) from Desulfovibrio vulgaris | 100% id, 100% cov |
RR42_RS20080: L-serine ammonia-lyase (EC 4.3.1.17) from Cupriavidus basilensis | 45% id, 100% cov |
BPHYT_RS19340: L-serine ammonia-lyase (EC 4.3.1.17) from Burkholderia phytofirmans | 45% id, 100% cov |
| DvMF_0565: aspartate ammonia-lyase (RefSeq) is similar to: | PaperBLAST |
Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa | 58% id, 99% cov |
Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni | 56% id, 99% cov |
ASPA_ECOLI / P0AC38: Aspartate ammonia-lyase; Aspartase; EC 4.3.1.1 from Escherichia coli | 54% id, 96% cov |
| DvMF_2075: fumarate hydratase, class II (RefSeq) is similar to: | PaperBLAST |
Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa | 39% id, 97% cov |
Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni | 38% id, 99% cov |
Q9LCC6: aspartate ammonia-lyase (EC 4.3.1.1) from Bacillus sp. | 37% id, 98% cov |
| DvMF_2658: cysteine synthase (RefSeq) is similar to: | PaperBLAST |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 25% id, 94% cov |
SRR_RAT / Q76EQ0: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus | 25% id, 83% cov |
SRR_HUMAN / Q9GZT4: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Homo sapiens | 25% id, 81% cov |
| DvMF_2237: tryptophan synthase subunit beta (RefSeq) is similar to: | PaperBLAST |
Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum | 28% id, 71% cov |
B1N2N4: L-serine ammonia-lyase (EC 4.3.1.17) from Entamoeba histolytica | 30% id, 42% cov |
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium | 21% id, 51% cov |
| DvMF_1488: protein of unknown function DUF1063 (RefSeq) is similar to: | PaperBLAST |
sdhA / P33073: L-serine dehydratase α subunit (EC 4.3.1.17) from Peptoniphilus asaccharolyticus | 25% id, 59% cov |
| DvMF_2463: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
agrE / Q8YMD9: arginine dihydrolase/ornithine cyclodeaminase (EC 4.3.1.12) from Nostoc sp. | 38% id, 36% cov |
| DvMF_1741: tryptophan synthase subunit beta (RefSeq) is similar to: | PaperBLAST |
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum | 31% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory