Curated BLAST
Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 52 curated entries in PaperBLAST's database that match '4.3.2.1'.
These curated entries have 37 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
DvMF_2305: imidazole glycerol phosphate synthase subunit HisH (RefSeq) is similar to: | PaperBLAST |
DvMF_2305: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 100% id, 100% cov |
DVU0285: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris | 89% id, 100% cov |
HSERO_RS20325: IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Herbaspirillum seropedicae | 40% id, 96% cov |
HIS5_ECOLI / P60595: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; EC 4.3.2.10; EC 3.5.1.2 from Escherichia coli HisH / b2023: imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) from Escherichia coli hisH / P60595: imidazole glycerol phosphate synthase subunit HisH (EC 4.3.2.10) from Escherichia coli | 38% id, 97% cov |
HIS5_MYCBO / P59957: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; EC 4.3.2.10; EC 3.5.1.2 from Mycobacterium bovis | 37% id, 96% cov |
Q5NMD4: imidazole glycerol-phosphate synthase (subunit 1/2) (EC 4.3.2.10) from Zymomonas mobilis | 36% id, 94% cov |
HIS5_THET8 / Q7SIC0: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; EC 4.3.2.10; EC 3.5.1.2 from Thermus thermophilus Q7SIC0: imidazole glycerol-phosphate synthase (subunit 2/2) (EC 4.3.2.10) from Thermus thermophilus | 37% id, 92% cov |
A4WHA5: imidazole glycerol-phosphate synthase (subunit 1/2) (EC 4.3.2.10) from Pyrobaculum arsenaticum | 31% id, 98% cov |
Q8ZY40: imidazole glycerol-phosphate synthase (subunit 1/2) (EC 4.3.2.10) from Pyrobaculum aerophilum | 31% id, 99% cov |
HIS5_THEMA / Q9X0C8: Imidazole glycerol phosphate synthase subunit HisH; IGP synthase glutaminase subunit; IGP synthase subunit HisH; ImGP synthase subunit HisH; IGPS subunit HisH; TmHisH; EC 4.3.2.10; EC 3.5.1.2 from Thermotoga maritima hisH / Q9X0C8: imidazole-glycerol-phosphate synthase glutamine amidotransferase subunit (EC 4.3.2.10) from Thermotoga maritima Q9X0C8: imidazole glycerol-phosphate synthase (subunit 1/2) (EC 4.3.2.10) from Thermotoga maritima | 31% id, 73% cov |
At-HF / Q9SZ30: imidazole-glycerol-phosphate synthase (EC 4.3.2.10) from Arabidopsis thaliana Q9SZ30: imidazole glycerol-phosphate synthase (EC 4.3.2.10) from Arabidopsis thaliana | 41% id, 34% cov |
HIS5_YEAST / P33734: Imidazole glycerol phosphate synthase hisHF; IGP synthase; IGPS; ImGP synthase; EC 4.3.2.10; EC 3.5.1.2 from Saccharomyces cerevisiae P33734: imidazole glycerol-phosphate synthase (EC 4.3.2.10) from Saccharomyces cerevisiae | 34% id, 37% cov |
More... |
DvMF_2304: imidazole glycerol phosphate synthase subunit HisF (RefSeq) is similar to: | PaperBLAST |
HIS6_THET8 / Q7SIB9: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermus thermophilus Q7SIB9: imidazole glycerol-phosphate synthase (subunit 1/2) (EC 4.3.2.10) from Thermus thermophilus | 52% id, 99% cov |
A4WHB6: imidazole glycerol-phosphate synthase (subunit 2/2) (EC 4.3.2.10) from Pyrobaculum arsenaticum | 49% id, 100% cov |
Q8ZY16: imidazole glycerol-phosphate synthase (subunit 2/2) (EC 4.3.2.10) from Pyrobaculum aerophilum | 48% id, 99% cov |
Q5NMD6: imidazole glycerol-phosphate synthase (subunit 2/2) (EC 4.3.2.10) from Zymomonas mobilis | 48% id, 98% cov |
HIS6_THEMA / Q9X0C6: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermotoga maritima hisF / Q9X0C6: imidazole-glycerol-phosphate synthase cycloligase subunit (EC 4.3.2.10) from Thermotoga maritima Q9X0C6: imidazole glycerol-phosphate synthase (subunit 2/2) (EC 4.3.2.10) from Thermotoga maritima | 45% id, 99% cov |
HIS6_ECOLI / P60664: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Escherichia coli HisF / b2025: imidazole glycerol phosphate synthase subunit HisF (EC 4.3.2.10) from Escherichia coli hisF / P60664: imidazole glycerol phosphate synthase subunit HisF (EC 4.3.2.10) from Escherichia coli | 40% id, 100% cov |
HIS5_YEAST / P33734: Imidazole glycerol phosphate synthase hisHF; IGP synthase; IGPS; ImGP synthase; EC 4.3.2.10; EC 3.5.1.2 from Saccharomyces cerevisiae P33734: imidazole glycerol-phosphate synthase (EC 4.3.2.10) from Saccharomyces cerevisiae | 35% id, 57% cov |
At-HF / Q9SZ30: imidazole-glycerol-phosphate synthase (EC 4.3.2.10) from Arabidopsis thaliana Q9SZ30: imidazole glycerol-phosphate synthase (EC 4.3.2.10) from Arabidopsis thaliana | 33% id, 53% cov |
More... |
DvMF_0048: argininosuccinate lyase (RefSeq) is similar to: | PaperBLAST |
ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp. | 48% id, 100% cov |
Q9P870: argininosuccinate lyase (EC 4.3.2.1) from Agaricus bisporus | 47% id, 99% cov |
Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans | 47% id, 98% cov |
ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli | 46% id, 98% cov |
ARLY_YEAST / P04076: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Saccharomyces cerevisiae | 44% id, 99% cov |
arg7 / RF|NP_595129.1: argininosuccinate lyase; EC 4.3.2.1 from Schizosaccharomyces pombe | 44% id, 99% cov |
ARLY_HUMAN / P04424: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Homo sapiens ASL / P04424: argininosuccinate lyase (EC 4.3.2.1) from Homo sapiens | 44% id, 98% cov |
ARLY_MOUSE / Q91YI0: Argininosuccinate lyase; ASAL; Arginosuccinase; EC 4.3.2.1 from Mus musculus | 44% id, 98% cov |
ARLY_COLLI / Q01592: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Columba livia | 43% id, 98% cov |
P9WPY7: argininosuccinate lyase (EC 4.3.2.1) from Mycobacterium tuberculosis | 44% id, 96% cov |
ARLY2_ANAPL / P24058: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin II; Delta-2 crystallin; EC 4.3.2.1 from Anas platyrhynchos | 43% id, 96% cov |
ARLY_ANSAN / P33110: Argininosuccinate lyase; ASAL; Arginosuccinase; Delta crystallin; EC 4.3.2.1 from Anser anser | 43% id, 96% cov |
Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis | 36% id, 88% cov |
N515DRAFT_3770: arginosuccinate lyase (EC 4.3.2.1) from Dyella japonica | 36% id, 86% cov |
BT3733: arginosuccinate lyase (EC 4.3.2.1) from Bacteroides thetaiotaomicron | 35% id, 85% cov |
CA265_RS18485: arginosuccinate lyase (EC 4.3.2.1) from Pedobacter sp. | 33% id, 86% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory