Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 13 curated entries in PaperBLAST's database that match '5.1.1.7'.
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
DvMF_0561: diaminopimelate epimerase (RefSeq) is similar to: | PaperBLAST |
DAPF_THEMA / Q9X1L0: Diaminopimelate epimerase; DAP epimerase; Dpm epimerase; PLP-independent amino acid racemase; EC 5.1.1.7 from Thermotoga maritima | 31% id, 96% cov |
E4NI20: diaminopimelate epimerase (EC 5.1.1.7) from Kitasatospora setae | 31% id, 94% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
660391-661353 (frame +1) on 254340 is similar to: | PaperBLAST |
E4NI20: diaminopimelate epimerase (EC 5.1.1.7) from Kitasatospora setae | 31% id, 98% cov |
Lawrence Berkeley National Laboratory