Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 12 curated entries in PaperBLAST's database that match ''.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_1969: 4-oxalocrotonate tautomerase family enzyme (RefSeq)
is similar to:

cnbG / Q38M36: 2-hydroxymuconate tautomerase (EC from Comamonas testosteroni

43% id,
87% cov

P49172: 2-hydroxymuconate tautomerase (EC from Pseudomonas sp.

33% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory