Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 86 curated entries in PaperBLAST's database that match '5.4.99.5'.
These curated entries have 59 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
DvMF_1749: prephenate dehydratase (RefSeq) is similar to: | PaperBLAST |
CMPDT_STUST / P27603: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Stutzerimonas stutzeri | 42% id, 98% cov |
CMPDT_ECOLI / P0A9J8: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli | 30% id, 95% cov |
C7EXK8: prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Escherichia coli | 30% id, 95% cov |
DvMF_1746: Anthranilate synthase (RefSeq) is similar to: | PaperBLAST |
MBTI_MYCTU / P9WFX1: Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis | 31% id, 88% cov |
DvMF_0799: thiamine biosynthesis protein ThiH (RefSeq) is similar to: | PaperBLAST |
PYLB_METBF / Q46E78: 3-methylornithine synthase; (2R,3R)-3-methylornithine synthase; (3R)-3-methyl-D-ornithine synthase; Pyrrolysine biosynthesis protein PylB; EC 5.4.99.58 from Methanosarcina barkeri | 25% id, 96% cov |
PYLB_METAC / Q8TUB9: 3-methylornithine synthase; (2R,3R)-3-methylornithine synthase; (3R)-3-methyl-D-ornithine synthase; Pyrrolysine biosynthesis protein PylB; EC 5.4.99.58 from Methanosarcina acetivorans | 24% id, 95% cov |
DvMF_0432: 2-dehydro-3-deoxyphosphooctonate aldolase (RefSeq) is similar to: | PaperBLAST |
P39912: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54); chorismate mutase (EC 5.4.99.5) from Bacillus subtilis | 31% id, 66% cov |
Echvi_0120: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase / chorismate mutase (EC 2.5.1.54; EC 5.4.99.5) from Echinicola vietnamensis | 25% id, 61% cov |
DvMF_1747: Prephenate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli | 29% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory