Searching in Desulfovibrio vulgaris Miyazaki F (Miya)
Found 13 curated entries in PaperBLAST's database that match '6.2.1.30' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query
| DvMF_0442: Phenylacetate--CoA ligase (RefSeq) is similar to: | PaperBLAST |
PAAK_THET2 / Q72K16: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Thermus thermophilus | 56% id, 100% cov |
PAAK_ECOLI / P76085: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Escherichia coli | 58% id, 97% cov |
B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 57% id, 97% cov |
| DvMF_1153: Phenylacetate--CoA ligase (RefSeq) is similar to: | PaperBLAST |
PAAK_THET2 / Q72K16: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Thermus thermophilus | 49% id, 98% cov |
PAAK_PSEPU / O33469: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Pseudomonas putida | 46% id, 97% cov |
B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 45% id, 97% cov |
| DvMF_1721: Phenylacetate--CoA ligase (RefSeq) is similar to: | PaperBLAST |
B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 44% id, 99% cov |
PAAK_ECOLI / P76085: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Escherichia coli | 42% id, 98% cov |
PAAK_PSEPU / O33469: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Pseudomonas putida | 41% id, 97% cov |
| DvMF_2446: phenylacetate-coenzyme A ligase, putative (RefSeq) is similar to: | PaperBLAST |
PAAK_THET2 / Q72K16: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Thermus thermophilus | 31% id, 98% cov |
B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 28% id, 97% cov |
PAAK_AROEV / Q9L9C1: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Aromatoleum evansii | 27% id, 99% cov |
| DvMF_0256: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 31% id, 90% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 28% id, 96% cov |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 30% id, 70% cov |
| DvMF_2357: AMP-binding domain protein (RefSeq) is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 29% id, 93% cov |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 29% id, 62% cov |
| DvMF_0636: coenzyme F390 synthetase-like protein (RefSeq) is similar to: | PaperBLAST |
B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 30% id, 74% cov |
PAAK_THET2 / Q72K16: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Thermus thermophilus | 31% id, 72% cov |
B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 30% id, 74% cov |
| DvMF_0662: Coenzyme F390 synthetase-like protein (RefSeq) is similar to: | PaperBLAST |
PAAK_AROEV / Q9L9C1: Phenylacetate-coenzyme A ligase; Phenylacetyl-CoA ligase; PA-CoA ligase; EC 6.2.1.30 from Aromatoleum evansii | 28% id, 67% cov |
B4E7B5: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 27% id, 69% cov |
B4EL89: phenylacetate-CoA ligase (EC 6.2.1.30) from Burkholderia cenocepacia | 27% id, 67% cov |
| DvMF_2783: acetate/CoA ligase (RefSeq) is similar to: | PaperBLAST |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 27% id, 47% cov |
| DvMF_1775: acetate/CoA ligase (RefSeq) is similar to: | PaperBLAST |
phl / O74725: phenylacetyl-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 26% id, 47% cov |
| DvMF_2243: AMP-dependent synthetase and ligase (RefSeq) is similar to: | PaperBLAST |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 26% id, 44% cov |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 23% id, 48% cov |
A7KUK6: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 24% id, 44% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2319-4250 (frame +3) on 254340 is similar to: | PaperBLAST |
D3GE78: phenylacetate-CoA ligase (EC 6.2.1.30) from Penicillium chrysogenum | 25% id, 98% cov |
Lawrence Berkeley National Laboratory