Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2099: glutamine synthetase, type I (RefSeq)
is similar to:

GLNA2_HALMT / I3R584: Gamma-glutamylputrescine synthetase; Gamma-Glu-Put synthetase; Glutamate--putrescine ligase; EC from Haloferax mediterranei

32% id,
96% cov

BPHYT_RS23160: Gamma-glutamyl-putrescine synthetase (EC from Burkholderia phytofirmans

31% id,
99% cov

SO1268: Glutamate--putrescine ligase (EC from Shewanella oneidensis

29% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory