Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Desulfovibrio vulgaris Miyazaki F (Miya)

Found 140 curated entries in PaperBLAST's database that match '6.3.1.2'.

These curated entries have 101 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Desulfovibrio vulgaris Miyazaki F, or try another query

DvMF_2756: phosphoribosylglycinamide formyltransferase 2 (RefSeq) is similar to:	PaperBLAST
E8X9F0: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Salmonella enterica	65% id, 100% cov
PURT_ECOLI / P33221: Formate-dependent phosphoribosylglycinamide formyltransferase; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2; GART 2; GAR transformylase T; Non-folate glycinamide ribonucleotide transformylase; Phosphoribosylglycinamide formyltransferase 2; EC 6.3.1.21 from Escherichia coli purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Escherichia coli	63% id, 100% cov
purT / Q58881: phosphoribosylglycinamide formyltransferase monomer (EC 6.3.1.21) from Methanocaldococcus jannaschii	61% id, 100% cov
P95197: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Mycobacterium tuberculosis	39% id, 95% cov
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DvMF_1590: glutamine synthetase catalytic region (RefSeq) is similar to:	PaperBLAST
glnN / Q31RW8: glutamine synthetase type III subunit (EC 6.3.1.2) from Synechococcus elongatus	59% id, 100% cov
gluN / Q4ZH57: glutamine synthetase subunit (EC 6.3.1.2) from Ruminococcus albus	53% id, 99% cov
Q5LGP1: glutamine synthetase (EC 6.3.1.2) from Bacteroides fragilis	43% id, 100% cov
GLNA3_BACFR / P15623: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Bacteroides fragilis	43% id, 100% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	25% id, 61% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	29% id, 51% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	29% id, 51% cov
GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei	24% id, 62% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	29% id, 39% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	26% id, 37% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	29% id, 32% cov
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DvMF_2099: glutamine synthetase, type I (RefSeq) is similar to:	PaperBLAST
GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei	54% id, 99% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	53% id, 99% cov
GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii	51% id, 98% cov
P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	51% id, 98% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	50% id, 98% cov
GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus	49% id, 98% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	49% id, 98% cov
GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	49% id, 95% cov
Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus	45% id, 98% cov
P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei	44% id, 97% cov
GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.	43% id, 96% cov
GLNA_SULAC / Q9HH09: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Sulfolobus acidocaldarius Q9HH09: glutamine synthetase (EC 6.3.1.2) from Sulfolobus acidocaldarius	42% id, 90% cov
GLNA_ARCFU / O29313: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Archaeoglobus fulgidus O29313: glutamine synthetase (EC 6.3.1.2) from Archaeoglobus fulgidus	37% id, 98% cov
GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti	32% id, 99% cov
F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	28% id, 98% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	43% id, 62% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	43% id, 61% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	43% id, 61% cov
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	43% id, 60% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	42% id, 62% cov
O85177: glutamine synthetase (EC 6.3.1.2) from Amycolatopsis mediterranei	41% id, 61% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	47% id, 53% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	40% id, 61% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	42% id, 58% cov
P46410: glutamine synthetase (EC 6.3.1.2) from Sus scrofa	24% id, 94% cov
GLNA_HUMAN / P15104: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Homo sapiens GLUL / P15104: glutamine synthetase subunit (EC 6.3.1.2) from Homo sapiens P15104: glutamine synthetase (EC 6.3.1.2) from Homo sapiens	25% id, 80% cov
GLNA_CANLF / Q8HZM5: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Canis lupus Q8HZM5: glutamine synthetase (EC 6.3.1.2) from Canis lupus	25% id, 80% cov
Q7ZVF2: glutamine synthetase (EC 6.3.1.2) from Danio rerio	27% id, 62% cov
Q7T2P7: glutamine synthetase (EC 6.3.1.2) from Danio rerio	26% id, 57% cov
GLNA_RAT / P09606: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Rattus norvegicus P09606: glutamine synthetase (EC 6.3.1.2) from Rattus norvegicus	29% id, 53% cov
GLNA_MOUSE / P15105: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Mus musculus P15105: glutamine synthetase (EC 6.3.1.2) from Mus musculus	28% id, 53% cov
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	26% id, 54% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	30% id, 46% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	31% id, 41% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	29% id, 42% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	34% id, 31% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	33% id, 32% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	36% id, 29% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	36% id, 29% cov
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DvMF_2306: carbamoyl-phosphate synthase, large subunit (RefSeq) is similar to:	PaperBLAST
purT / Q58881: phosphoribosylglycinamide formyltransferase monomer (EC 6.3.1.21) from Methanocaldococcus jannaschii	21% id, 95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory