Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 27 curated entries in PaperBLAST's database that match '1.1.1.14' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_2448: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

40% id,
93% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

34% id,
98% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

34% id,
99% cov

More...

Dsui_2312: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

35% id,
99% cov

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

36% id,
94% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

32% id,
99% cov

More...

Dsui_2538: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

37% id,
91% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

33% id,
95% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

31% id,
97% cov

More...

Dsui_0780: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

35% id,
93% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

31% id,
96% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

26% id,
98% cov

Dsui_2228: Zn-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

34% id,
94% cov

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

29% id,
88% cov

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

30% id,
80% cov

More...

Dsui_3259: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

35% id,
90% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

33% id,
96% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

32% id,
97% cov

More...

Dsui_1624: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

30% id,
96% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

29% id,
98% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

29% id,
95% cov

More...

Dsui_0680: short-chain dehydrogenase of unknown substrate specificity
is similar to:
PaperBLAST

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

30% id,
91% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

34% id,
76% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

33% id,
78% cov

More...

Dsui_1229: Zn-dependent oxidoreductase, NADPH:quinone reductase
is similar to:
PaperBLAST

DHSO_SHEEP / P07846: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries

29% id,
90% cov

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus

29% id,
90% cov

Dsui_2089: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

27% id,
97% cov

Dsui_0676: short-chain dehydrogenase of unknown substrate specificity
is similar to:
PaperBLAST

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

30% id,
80% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

32% id,
72% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

32% id,
70% cov

More...

Dsui_1592: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
is similar to:
PaperBLAST

Q3C2L6: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum

46% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

677808-678656 (frame -3) on CP003153
is similar to:
PaperBLAST

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.
Also see hits to annotated proteins above

30% id,
93% cov

1671615-1673426 (frame +3) on CP003153
is similar to:
PaperBLAST

Q3C2L6: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum
Also see hits to annotated proteins above

38% id,
18% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory