Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).

These curated entries have 63 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1582: Fe-S oxidoreductase
is similar to:
PaperBLAST

lutA / O07020: iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

48% id,
100% cov

Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

36% id,
90% cov

Dsui_1583: (4Fe-4S) cluster-containing protein
is similar to:
PaperBLAST

lutB / O07021: component of an iron-sulfur oxidase linked to L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

44% id,
98% cov

Q5F883: L-lactate dehydrogenase (subunit 1/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

45% id,
95% cov

lutC / O32259: component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

24% id,
35% cov

Dsui_0126: (4Fe-4S) cluster-containing protein
is similar to:
PaperBLAST

Q5F883: L-lactate dehydrogenase (subunit 1/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

42% id,
98% cov

lutB / O07021: component of an iron-sulfur oxidase linked to L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

41% id,
98% cov

Dsui_1668: alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
is similar to:
PaperBLAST

Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans

32% id,
97% cov

Dsui_1584: hypothetical protein
is similar to:
PaperBLAST

Q5F884: L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

25% id,
94% cov

lutC / O32259: component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

35% id,
53% cov

Q5F883: L-lactate dehydrogenase (subunit 1/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

29% id,
19% cov

More...

Dsui_3413: Fe-S oxidoreductase
is similar to:
PaperBLAST

Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

23% id,
89% cov

Dsui_0123: hypothetical protein
is similar to:
PaperBLAST

lutC / O32259: component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

35% id,
57% cov

Q5F884: L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

36% id,
42% cov

lutB / O07021: component of an iron-sulfur oxidase linked to L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

23% id,
20% cov

Dsui_1631: cytochrome c oxidase accessory protein FixG
is similar to:
PaperBLAST

Q5F883: L-lactate dehydrogenase (subunit 1/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

29% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory