Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 24 curated entries in PaperBLAST's database that match '1.1.1.6' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3259: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

33% id,
93% cov

Dsui_2448: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

32% id,
94% cov

Dsui_2312: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

31% id,
96% cov

Dsui_2538: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

30% id,
93% cov

Dsui_0694: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

28% id,
97% cov

Dsui_0680: short-chain dehydrogenase of unknown substrate specificity
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

34% id,
74% cov

Dsui_2203: enoyl-(acyl-carrier-protein) reductase (NADH)
is similar to:
PaperBLAST

GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua

25% id,
95% cov

Dsui_2116: Fe-dependent oxidoreductase, alcohol dehydrogenase
is similar to:
PaperBLAST

ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans

26% id,
82% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory