Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_2448: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

33% id,
92% cov

Dsui_2538: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
92% cov

Dsui_2228: Zn-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

Q9WYD4: mannitol 2-dehydrogenase (EC 1.1.1.67) from Thermotoga maritima

27% id,
99% cov

Dsui_0780: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
92% cov

Dsui_3259: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2607296-2608117 (frame +2) on CP003153
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

32% id,
98% cov

787394-788170 (frame +2) on CP003153
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina
Also see hits to annotated proteins above

27% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory