Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 110 curated entries in PaperBLAST's database that match '1.1.1.9'.

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0736: FAD/FMN-dependent dehydrogenase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

68% id,
98% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

68% id,
91% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

73% id,
5% cov

Dsui_2209: malate dehydrogenase
is similar to:
PaperBLAST

MDHC_HUMAN / P40925: Malate dehydrogenase, cytoplasmic; Aromatic alpha-keto acid reductase; KAR; Cytosolic malate dehydrogenase; EC 1.1.1.37; EC 1.1.1.96 from Homo sapiens

49% id,
99% cov

MDHC_PIG / P11708: Malate dehydrogenase, cytoplasmic; Aromatic alpha-keto acid reductase; KAR; Cytosolic malate dehydrogenase; EC 1.1.1.37; EC 1.1.1.96 from Sus scrofa

49% id,
99% cov

MDHC_MOUSE / P14152: Malate dehydrogenase, cytoplasmic; Aromatic alpha-keto acid reductase; KAR; Cytosolic malate dehydrogenase; EC 1.1.1.37; EC 1.1.1.96 from Mus musculus

49% id,
99% cov

Dsui_1277: glycerol-3-phosphate dehydrogenase
is similar to:
PaperBLAST

GpsA / b3608: glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) from Escherichia coli
gpsA / P0A6S7: glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) from Escherichia coli
P0A6S7: glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) from Escherichia coli

46% id,
98% cov

gpsA / Q97ID6: glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) from Clostridium acetobutylicum

39% id,
98% cov

GPDA_BACSU / P46919: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; NAD(P)H-dependent dihydroxyacetone-phosphate reductase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; EC 1.1.1.94 from Bacillus subtilis

38% id,
96% cov

More...

Dsui_3198: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

EBL86_19295 / A0A3G6WGL6: L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) from Cereibacter sphaeroides

36% id,
98% cov

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

35% id,
97% cov

TTUC_PSEPU / Q51945: Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida
U05986.1 / Q51945: tartrate dehydrogenase subunit (EC 1.1.1.83; EC 1.1.1.93) from Pseudomonas putida

35% id,
98% cov

Dsui_2312: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

34% id,
98% cov

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

31% id,
98% cov

Dsui_3259: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

34% id,
97% cov

Dsui_2228: Zn-dependent alcohol dehydrogenase
is similar to:
PaperBLAST

M5AJW4: coniferyl-alcohol dehydrogenase (EC 1.1.1.194); aryl-alcohol dehydrogenase (EC 1.1.1.90) from Streptomyces sp.

32% id,
100% cov

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

34% id,
94% cov

W6CX26: alcohol dehydrogenase (EC 1.1.1.1); aryl-alcohol dehydrogenase (EC 1.1.1.90); aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Yokenella sp.

31% id,
99% cov

More...

Dsui_2538: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
98% cov

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

29% id,
97% cov

Dsui_2448: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

32% id,
98% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

28% id,
98% cov

Dsui_0680: short-chain dehydrogenase of unknown substrate specificity
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

34% id,
86% cov

Dsui_2089: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

30% id,
97% cov

Dsui_0780: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
98% cov

Dsui_3296: isocitrate dehydrogenase, NADP-dependent, prokaryotic type
is similar to:
PaperBLAST

TTUC_PSEPU / Q51945: Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida
U05986.1 / Q51945: tartrate dehydrogenase subunit (EC 1.1.1.83; EC 1.1.1.93) from Pseudomonas putida

28% id,
99% cov

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

29% id,
93% cov

Dsui_1624: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

28% id,
98% cov

Dsui_1229: Zn-dependent oxidoreductase, NADPH:quinone reductase
is similar to:
PaperBLAST

DHSO_SHEEP / P07846: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries

29% id,
90% cov

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus

29% id,
90% cov

Q2Z1W3: aryl-alcohol dehydrogenase (EC 1.1.1.90) from Rhodococcus erythropolis

27% id,
46% cov

More...

Dsui_3371: putative oxidoreductase, aryl-alcohol dehydrogenase like protein
is similar to:
PaperBLAST

Q07747: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Saccharomyces cerevisiae

28% id,
90% cov

P42884: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Saccharomyces cerevisiae

27% id,
86% cov

DkgB / b0207: methylglyoxal reductase DkgB (EC 1.1.1.91; EC 1.1.1.346) from Escherichia coli
dkgB / P30863: methylglyoxal reductase DkgB (EC 1.1.1.21; EC 1.1.1.91; EC 1.1.1.346) from Escherichia coli

26% id,
84% cov

More...

Dsui_3031: enoyl-(acyl-carrier-protein) reductase (NADH)
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

24% id,
100% cov

Dsui_0676: short-chain dehydrogenase of unknown substrate specificity
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

32% id,
71% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
69% cov

Dsui_0124: lactate dehydrogenase-like oxidoreductase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

26% id,
83% cov

Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa

31% id,
71% cov

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli
C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

31% id,
69% cov

More...

Dsui_2542: FAD/FMN-dependent dehydrogenase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

31% id,
12% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

29% id,
13% cov

Dsui_3415: FAD/FMN-dependent dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

29% id,
12% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

31% id,
11% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

36% id,
7% cov

More...

Dsui_0378: FAD/FMN-dependent dehydrogenase
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

33% id,
8% cov

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

32% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

732033-735950 (frame +3) on CP003153
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae
Also see hits to annotated proteins above

67% id,
99% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans
Also see hits to annotated proteins above

67% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory