Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.

These curated entries have 126 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_2065: hypothetical protein, contains double-stranded beta-helix domain
is similar to:
PaperBLAST

MTND_BACSU / O31669: Acireductone dioxygenase; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; EC 1.13.11.54; EC 1.13.11.53 from Bacillus subtilis

29% id,
72% cov

MTND_KLEOX / Q9ZFE7: Acireductone dioxygenase; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; EC 1.13.11.54; EC 1.13.11.53 from Klebsiella oxytoca
mtnD / Q9ZFE7: acireductone dioxygenase (EC 1.13.11.54; EC 1.13.11.53) from Klebsiella oxytoca
Q9ZFE7: acireductone dioxygenase (Ni2+-requiring) (EC 1.13.11.53); acireductone dioxygenase [iron(II)-requiring] (EC 1.13.11.54) from Klebsiella oxytoca

39% id,
53% cov

MTND_MOUSE / Q99JT9: Acireductone dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD; Membrane-type 1 matrix metalloproteinase cytoplasmic tail-binding protein 1; MTCBP-1; EC 1.13.11.54; EC 1.13.11.53 from Mus musculus
Q99JT9: acireductone dioxygenase (Ni2+-requiring) (EC 1.13.11.53); acireductone dioxygenase [iron(II)-requiring] (EC 1.13.11.54) from Mus musculus

36% id,
55% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory