Curated BLAST for Genomes


Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 10 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1092: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
is similar to:

Pf6N2E2_2914: 4-hydroxybenzoate 3-monooxygenase (EC from Pseudomonas fluorescens

22% id,
86% cov

Dsui_1097: NADH/NADPH-dependent glutamate synthase small subunit
is similar to:

pobA / F2JUE7: 4-hydroxybenzoate 3-monooxygenase (EC from Marinomonas mediterranea

26% id,
53% cov

RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC from Cupriavidus basilensis

32% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory