Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.38' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0782: N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form
is similar to:
PaperBLAST

SMc01801: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Sinorhizobium meliloti

47% id,
100% cov

Ga0059261_0351: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Sphingomonas koreensis

44% id,
100% cov

N515DRAFT_3769: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Dyella japonica

28% id,
97% cov

More...

Dsui_1309: acetylglutamate kinase
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

31% id,
30% cov

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

30% id,
31% cov

Dsui_1570: amino-acid N-acetyltransferase
is similar to:
PaperBLAST

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

26% id,
32% cov

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

26% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory