Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 33 curated entries in PaperBLAST's database that match '1.3.1.12'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1941: prephenate dehydrogenase
is similar to:
PaperBLAST

TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis

35% id,
96% cov

O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus

37% id,
90% cov

J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium

35% id,
80% cov

More...

Dsui_2448: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

SPS19_YEAST / P32573: Peroxisomal 2,4-dienoyl-CoA reductase SPS19 [(3E)-enoyl-CoA-producing]; Sporulation-specific protein SPX19; EC 1.3.1.124 from Saccharomyces cerevisiae
SPS19 / P32573: 2,4-dienoyl-CoA reductase (EC 1.3.1.124) from Saccharomyces cerevisiae

33% id,
85% cov

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus

32% id,
86% cov

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana

30% id,
86% cov

More...

Dsui_2089: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus

32% id,
87% cov

DECR2_RAT / Q9Z2M4: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; DCR-AKL; pVI-AKL; EC 1.3.1.124 from Rattus norvegicus

30% id,
84% cov

SPS19_YEAST / P32573: Peroxisomal 2,4-dienoyl-CoA reductase SPS19 [(3E)-enoyl-CoA-producing]; Sporulation-specific protein SPX19; EC 1.3.1.124 from Saccharomyces cerevisiae
SPS19 / P32573: 2,4-dienoyl-CoA reductase (EC 1.3.1.124) from Saccharomyces cerevisiae

29% id,
84% cov

More...

Dsui_2538: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus

30% id,
86% cov

SPS19_YEAST / P32573: Peroxisomal 2,4-dienoyl-CoA reductase SPS19 [(3E)-enoyl-CoA-producing]; Sporulation-specific protein SPX19; EC 1.3.1.124 from Saccharomyces cerevisiae
SPS19 / P32573: 2,4-dienoyl-CoA reductase (EC 1.3.1.124) from Saccharomyces cerevisiae

27% id,
85% cov

Dsui_3259: dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
is similar to:
PaperBLAST

DECR2_HUMAN / Q9NUI1: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; pDCR; 2,4-dienoyl-CoA reductase 2; Short chain dehydrogenase/reductase family 17C member 1; EC 1.3.1.124 from Homo sapiens

30% id,
83% cov

DECR2_RAT / Q9Z2M4: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; DCR-AKL; pVI-AKL; EC 1.3.1.124 from Rattus norvegicus

30% id,
83% cov

DECR2_MOUSE / Q9WV68: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; EC 1.3.1.124 from Mus musculus

30% id,
83% cov

More...

Dsui_3031: enoyl-(acyl-carrier-protein) reductase (NADH)
is similar to:
PaperBLAST

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus

27% id,
88% cov

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana

27% id,
85% cov

DECR2_RAT / Q9Z2M4: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; DCR-AKL; pVI-AKL; EC 1.3.1.124 from Rattus norvegicus

27% id,
84% cov

More...

Dsui_0780: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

SPS19_YEAST / P32573: Peroxisomal 2,4-dienoyl-CoA reductase SPS19 [(3E)-enoyl-CoA-producing]; Sporulation-specific protein SPX19; EC 1.3.1.124 from Saccharomyces cerevisiae
SPS19 / P32573: 2,4-dienoyl-CoA reductase (EC 1.3.1.124) from Saccharomyces cerevisiae

27% id,
85% cov

DECR_HUMAN / Q16698: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial; 2,4-dienoyl-CoA reductase [NADPH]; 4-enoyl-CoA reductase [NADPH]; Short chain dehydrogenase/reductase family 18C member 1; EC 1.3.1.124 from Homo sapiens

27% id,
73% cov

Dsui_2203: enoyl-(acyl-carrier-protein) reductase (NADH)
is similar to:
PaperBLAST

DECR2_HUMAN / Q9NUI1: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; pDCR; 2,4-dienoyl-CoA reductase 2; Short chain dehydrogenase/reductase family 17C member 1; EC 1.3.1.124 from Homo sapiens

27% id,
84% cov

DECR2_RAT / Q9Z2M4: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; DCR-AKL; pVI-AKL; EC 1.3.1.124 from Rattus norvegicus

26% id,
84% cov

DECR2_MOUSE / Q9WV68: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; EC 1.3.1.124 from Mus musculus

26% id,
84% cov

More...

Dsui_2312: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana

25% id,
87% cov

Dsui_1940: chorismate mutase, clade 2
is similar to:
PaperBLAST

O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus

33% id,
56% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2607296-2608117 (frame +2) on CP003153
is similar to:
PaperBLAST

SPS19_YEAST / P32573: Peroxisomal 2,4-dienoyl-CoA reductase SPS19 [(3E)-enoyl-CoA-producing]; Sporulation-specific protein SPX19; EC 1.3.1.124 from Saccharomyces cerevisiae
SPS19 / P32573: 2,4-dienoyl-CoA reductase (EC 1.3.1.124) from Saccharomyces cerevisiae
Also see hits to annotated proteins above

33% id,
87% cov

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus
Also see hits to annotated proteins above

32% id,
89% cov

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana
Also see hits to annotated proteins above

30% id,
88% cov

More...

2467594-2468580 (frame +1) on CP003153
is similar to:
PaperBLAST

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana
Also see hits to annotated proteins above

25% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory