Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 38 curated entries in PaperBLAST's database that match '2.3.3.13' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3519: 2-isopropylmalate synthase, bacterial type
is similar to:
PaperBLAST

LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis
Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis

70% id,
99% cov

LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans

53% id,
100% cov

LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli
leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli

53% id,
96% cov

More...

Dsui_3227: 2-isopropylmalate synthase
is similar to:
PaperBLAST

LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum

54% id,
92% cov

LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis
LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis
P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis

55% id,
83% cov

LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae

48% id,
93% cov

More...

Dsui_0578: homocitrate synthase NifV
is similar to:
PaperBLAST

LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius

40% id,
91% cov

A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii

37% id,
86% cov

Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis

34% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory