Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0578: homocitrate synthase NifV
is similar to:		 PaperBLAST

NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii
nifV / P05342: homocitrate synthase monomer (EC 2.3.3.14) from Azotobacter vinelandii

 59% id,
98% cov

P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp.

 50% id,
97% cov

A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp.

 52% id,
93% cov

More...

Dsui_3519: 2-isopropylmalate synthase, bacterial type
is similar to:		 PaperBLAST

D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus

 48% id,
94% cov

P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp.

 36% id,
99% cov

AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii

 38% id,
91% cov

More...

Dsui_3227: 2-isopropylmalate synthase
is similar to:		 PaperBLAST

D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus

 26% id,
94% cov

A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp.

 25% id,
95% cov

AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii

 27% id,
85% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory