Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0061: glycosyltransferase
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

29% id,
26% cov

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

28% id,
26% cov

F8SM21: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare

23% id,
28% cov

More...

Dsui_0393: glycosyltransferase
is similar to:
PaperBLAST

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

30% id,
19% cov

Dsui_0468: glycosyltransferase
is similar to:
PaperBLAST

CAA26229.1: sucrose synthase 1 (SH-1) (EC 2.4.1.13)

23% id,
22% cov

AAF85966.1: sucrose synthase-2 (Susy2) (EC 2.4.1.13)

27% id,
14% cov

SUS1_HORVU / P31922: Sucrose synthase 1; Sucrose-UDP glucosyltransferase 1; EC 2.4.1.13 from Hordeum vulgare
CAA46701.1: sucrose synthase 1 (Ss1) (EC 2.4.1.13)
P31922: sucrose synthase (EC 2.4.1.13) from Hordeum vulgare

42% id,
5% cov

Dsui_1787: glycosyltransferase
is similar to:
PaperBLAST

AAM95943.1: sucrose synthase (Sus1) (EC 2.4.1.13)

29% id,
17% cov

K9K7W3: sucrose synthase (EC 2.4.1.13) from Cucumis sativus

29% id,
16% cov

CAA57881.1: sucrose synthase (Css1) (EC 2.4.1.13)

30% id,
15% cov

More...

Dsui_1854: hypothetical protein
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

51% id,
4% cov

Dsui_1001: hypothetical protein
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

47% id,
4% cov

Dsui_0209: hypothetical protein
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

56% id,
3% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory