Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 63 curated entries in PaperBLAST's database that match '2.4.2.1' as complete word(s).

These curated entries have 44 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_2531: uncharacterized protein, YfiH family
is similar to:
PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

57% id,
98% cov

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

37% id,
92% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

35% id,
89% cov

More...

Dsui_3052: triosephosphate isomerase
is similar to:
PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

44% id,
92% cov

Dsui_2698: purine nucleoside phosphorylase
is similar to:
PaperBLAST

PNPH_THEKO / Q5JJB8: Probable 6-oxopurine nucleoside phosphorylase; Purine nucleoside phosphorylase; PNP; EC 2.4.2.1 from Thermococcus kodakarensis

44% id,
87% cov

PNPH_PYRFU / Q8U2I1: 6-oxopurine nucleoside phosphorylase; Purine nucleoside phosphorylase; PNP; PfPNP; EC 2.4.2.1 from Pyrococcus furiosus
Q8U2I1: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pyrococcus furiosus

44% id,
85% cov

salT / B0L7E7: chloro-purine nucleoside phosphorylase (EC 2.4.2.1) from Salinispora tropica
B0L7E7: purine-nucleoside phosphorylase (EC 2.4.2.1) from Salinispora tropica

37% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3266766-3267524 (frame -3) on CP003153
is similar to:
PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens
Also see hits to annotated proteins above

44% id,
96% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory