Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3185: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa

64% id,
96% cov

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

39% id,
99% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

37% id,
97% cov

More...

Dsui_2042: cystathionine beta-lyase/cystathionine gamma-synthase
is similar to:
PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

56% id,
99% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

54% id,
97% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

53% id,
97% cov

More...

Dsui_0429: cystathionine beta-lyase/cystathionine gamma-synthase
is similar to:
PaperBLAST

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

45% id,
97% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

45% id,
97% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

40% id,
97% cov

More...

Dsui_3018: OAH/OAS sulfhydrylase
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

39% id,
100% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

35% id,
100% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

34% id,
98% cov

More...

Dsui_2039: OAH/OAS sulfhydrylase
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

36% id,
98% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

36% id,
98% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

36% id,
98% cov

More...

Dsui_2241: OAH/OAS sulfhydrylase
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

35% id,
93% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

32% id,
98% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

32% id,
98% cov

More...

Dsui_3376: aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

32% id,
40% cov

Dsui_2371: cysteine desulfurase IscS
is similar to:
PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

22% id,
31% cov

Dsui_1577: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
is similar to:
PaperBLAST

CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana

32% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory