Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3444: phospho-2-dehydro-3-deoxyheptonate aldolase
is similar to:
PaperBLAST

AroG / b0754: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
aroG / P0AB91: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
C3TIE2: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli

67% id,
99% cov

Q9K169: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Neisseria meningitidis

63% id,
98% cov

2-dehydro-3-deoxyphosphoheptonate aldolase / b1704: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli
aroH / P00887: 3-deoxy-7-phosphoheptulonate synthase, Trp-sensitive (EC 2.5.1.54) from Escherichia coli

56% id,
99% cov

More...

Dsui_2381: phospho-2-dehydro-3-deoxyheptonate aldolase
is similar to:
PaperBLAST

AroF / b2601: 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive (EC 2.5.1.54) from Escherichia coli
aroF / P00888: 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive (EC 2.5.1.54) from Escherichia coli
P00888: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli

55% id,
100% cov

AroG / b0754: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
aroG / P0AB91: 3-deoxy-7-phosphoheptulonate synthase, Phe-sensitive (EC 2.5.1.54) from Escherichia coli
C3TIE2: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Escherichia coli

51% id,
97% cov

Q9K169: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Neisseria meningitidis

49% id,
94% cov

More...

Dsui_2314: 3-deoxy-8-phosphooctulonate synthase
is similar to:
PaperBLAST

Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix

32% id,
79% cov

Q9WYH8: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Thermotoga maritima

29% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory