Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 4 curated entries in PaperBLAST's database that match '2.6.1.118' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3250: acetylornithine/succinylornithine aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus
lysJ / Q93R93: L-2-aminoadipate semialdehyde transaminase monomer (EC 2.6.1.118) from Thermus thermophilus
Q93R93: [amino group carrier protein]-gamma-(L-lysyl)-L-glutamate aminotransferase (EC 2.6.1.118) from Thermus thermophilus

38% id,
94% cov

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

33% id,
97% cov

Dsui_0023: acetylornithine/succinylornithine aminotransferase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus
lysJ / Q93R93: L-2-aminoadipate semialdehyde transaminase monomer (EC 2.6.1.118) from Thermus thermophilus
Q93R93: [amino group carrier protein]-gamma-(L-lysyl)-L-glutamate aminotransferase (EC 2.6.1.118) from Thermus thermophilus

36% id,
94% cov

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

34% id,
95% cov

Dsui_0664: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:
PaperBLAST

LYSJ_THET2 / Q93R93: [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.118 from Thermus thermophilus
lysJ / Q93R93: L-2-aminoadipate semialdehyde transaminase monomer (EC 2.6.1.118) from Thermus thermophilus
Q93R93: [amino group carrier protein]-gamma-(L-lysyl)-L-glutamate aminotransferase (EC 2.6.1.118) from Thermus thermophilus

37% id,
74% cov

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

32% id,
82% cov

Dsui_2880: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

lysJ / Q4JAP8: [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) from Sulfolobus acidocaldarius

26% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory