Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 26 curated entries in PaperBLAST's database that match '2.6.1.13' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0023: acetylornithine/succinylornithine aminotransferase
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 42% id,
92% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 37% id,
93% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 35% id,
92% cov

More...

Dsui_3250: acetylornithine/succinylornithine aminotransferase
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 40% id,
96% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

 35% id,
95% cov

OAT_PLAF7 / Q6LFH8: Ornithine aminotransferase; PfOAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Plasmodium falciparum
Q6LFH8: ornithine aminotransferase (EC 2.6.1.13) from Plasmodium falciparum

 35% id,
94% cov

More...

Dsui_2880: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:		 PaperBLAST

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

 29% id,
91% cov

OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans
otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans

 28% id,
90% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

 26% id,
93% cov

More...

Dsui_0664: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

 30% id,
79% cov

OAT_YEAST / P07991: Ornithine aminotransferase; OTAse; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

 28% id,
78% cov

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

 30% id,
73% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3490785-3492089 (frame -3) on CP003153
is similar to:		 PaperBLAST

aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
Also see hits to annotated proteins above

 39% id,
99% cov

OAT_EMENI / Q92413: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Emericella nidulans
otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans
Also see hits to annotated proteins above

 33% id,
94% cov

B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum
Also see hits to annotated proteins above

 34% id,
90% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory