Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 8 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_3250: acetylornithine/succinylornithine aminotransferase
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

31% id,
92% cov

LAT_MYCTU / P9WQ77: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Mycobacterium tuberculosis
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

31% id,
90% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

29% id,
90% cov

More...

Dsui_0023: acetylornithine/succinylornithine aminotransferase
is similar to:
PaperBLAST

LAT_STRCL / Q01767: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Streptomyces clavuligerus

31% id,
89% cov

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

31% id,
90% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

32% id,
88% cov

More...

Dsui_2880: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

LAT_MYCTU / P9WQ77: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Mycobacterium tuberculosis
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

27% id,
95% cov

Dsui_0664: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:
PaperBLAST

LAT_AMYLA / Q05174: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; Lysine:2-ketoglutarate 6-aminotransferase; EC 2.6.1.36 from Amycolatopsis lactamdurans

27% id,
77% cov

LAT_MYCTU / P9WQ77: L-lysine-epsilon aminotransferase; L-lysine aminotransferase; LAT; Lysine 6-aminotransferase; EC 2.6.1.36 from Mycobacterium tuberculosis
P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

24% id,
74% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

27% id,
61% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory