Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0023: acetylornithine/succinylornithine aminotransferase
is similar to:
PaperBLAST

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

46% id,
89% cov

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

46% id,
89% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

45% id,
91% cov

More...

Dsui_3250: acetylornithine/succinylornithine aminotransferase
is similar to:
PaperBLAST

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

42% id,
96% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

41% id,
96% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

41% id,
96% cov

More...

Dsui_0664: glutamate-1-semialdehyde-2,1-aminomutase
is similar to:
PaperBLAST

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

30% id,
95% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

30% id,
95% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

32% id,
83% cov

More...

Dsui_2880: adenosylmethionine-8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

Echvi_3848: N-succinylornithine aminotransferase (EC 2.6.1.81) from Echinicola vietnamensis

30% id,
92% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

28% id,
96% cov

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

28% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory