Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1414: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

72% id,
100% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

68% id,
100% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

67% id,
100% cov

More...

Dsui_0540: L-threonine-O-3-phosphate decarboxylase
is similar to:
PaperBLAST

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

28% id,
94% cov

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

27% id,
94% cov

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

27% id,
94% cov

More...

Dsui_0132: aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

29% id,
78% cov

Dsui_3376: aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

25% id,
88% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

28% id,
73% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

27% id,
74% cov

Dsui_0883: transcriptional regulator with HTH domain and aminotransferase domain
is similar to:
PaperBLAST

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

24% id,
79% cov

Dsui_2708: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

23% id,
78% cov

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

27% id,
57% cov

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

29% id,
46% cov

More...

Dsui_2909: aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

HIS8_CALS4 / Q8R5Q4: Histidinol-phosphate aminotransferase; Histidine transaminase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9; EC 2.6.1.38 from Caldanaerobacter subterraneus

29% id,
62% cov

Dsui_0420: transcriptional regulator with HTH domain and aminotransferase domain
is similar to:
PaperBLAST

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

25% id,
62% cov

Dsui_2908: aspartate/tyrosine/aromatic aminotransferase
is similar to:
PaperBLAST

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

29% id,
47% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

27% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory