Curated BLAST for Genomes

 

Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 16 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1094: shikimate kinase
is similar to:
PaperBLAST

Q8NMT0: gluconokinase (EC 2.7.1.12) from Corynebacterium glutamicum

23% id,
93% cov

GntV / b4268: D-gluconate kinase, thermosensitive (EC 2.7.1.12) from Escherichia coli
idnK / GB|AAC77225.1: gluconokinase; EC 2.7.1.12 from Escherichia coli
idnK / P39208: D-gluconate kinase, thermosensitive (EC 2.7.1.12) from Escherichia coli

22% id,
84% cov

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

43% id,
25% cov

More...

Dsui_1522: serine/threonine protein kinase
is similar to:
PaperBLAST

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

30% id,
55% cov

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

31% id,
47% cov

Dsui_1449: protein kinase family protein
is similar to:
PaperBLAST

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

30% id,
49% cov

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

30% id,
48% cov

Dsui_0112: serine/threonine protein kinase
is similar to:
PaperBLAST

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

27% id,
49% cov

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

27% id,
46% cov

Dsui_0697: protein kinase family protein
is similar to:
PaperBLAST

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

30% id,
44% cov

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

27% id,
47% cov

Dsui_3079: serine/threonine protein kinase
is similar to:
PaperBLAST

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

29% id,
44% cov

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

27% id,
46% cov

Dsui_2490: protein kinase family protein
is similar to:
PaperBLAST

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus

27% id,
25% cov

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus

28% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1584016-1585431 (frame -2) on CP003153
is similar to:
PaperBLAST

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus
Also see hits to annotated proteins above

30% id,
57% cov

110477-112006 (frame +2) on CP003153
is similar to:
PaperBLAST

Q29502: gluconokinase (EC 2.7.1.12) from Oryctolagus cuniculus
Also see hits to annotated proteins above

25% id,
63% cov

Q61036: gluconokinase (EC 2.7.1.12); non-specific serine/threonine protein kinase (EC 2.7.11.1) from Mus musculus
Also see hits to annotated proteins above

26% id,
60% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory