Curated BLAST for Genomes


Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 31 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_1952: D-heptose-7- phosphate 1-kinase
is similar to:

RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC from Escherichia coli
RbsK / b3752: ribokinase (EC from Escherichia coli
rbsK / P0A9J6: ribokinase (EC from Escherichia coli

23% id,
98% cov

BWI76_RS00290: Ribokinase (EC from Klebsiella michiganensis

20% id,
94% cov

Dsui_1574: ribose 5-phosphate isomerase
is similar to:

RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC; EC from Fructilactobacillus sanfranciscensis

34% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory