Curated BLAST for Genomes


Curated BLAST

Searching in Dechlorosoma suillum PS (PS)

Found 41 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dechlorosoma suillum PS, or try another query

Dsui_0801: transcriptional regulator/sugar kinase
is similar to:

Sama_2231: glucokinase (EC from Shewanella amazonensis

53% id,
99% cov

Sama_1405: glucokinase (EC from Shewanella amazonensis

52% id,
95% cov

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC from Streptomyces coelicolor
glkA: glucokinase; EC from Streptomyces coelicolor
P0A4E1: glucokinase (EC from Streptomyces coelicolor

32% id,
97% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory